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Open Access, Post 1 Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt am Main, Max-von-Laue Strae 7, 60438 Frankfurt, Germany 2 Institute of Biophysics, Goethe University Frankfurt am Main, Max-von-Laue Strae 1, 60438 Frankfurt, Germany 3 Department of Chemistry, Philipps-Universitt Marburg, Hans-Meerwein-Strae 4, 35032 Marburg, Germany 4 Center for Synthetic Microbiology, Philipps-Universitt Marburg, Hans-Meerwein-Strae 6, 35032 Marburg, Germany * Authors to whom correspondence should be attended to.
Knotless phytochromes are among the three primary subgroups classified by their distinct lack of the PAS domain in their photosensory core module, which is in contrast to the canonical PAS-GAF-PHY range. Regardless of intensive research on the ultrafast photodynamics of phytochromes, little is understood about the primary kinetics in knotless phytochromes.
Our results show that the excited state life time of Pr * (200 ps) is similar to bacteriophytochromes, however a lot longer than in the majority of canonical phytochromes. We appoint the sluggish Pr * kinetics to relaxation procedures of the chromophore-binding pocket that controls the bilin chromophore's isomerization step. The Pfr photoconversion characteristics begins with a much faster fired up state relaxation than in canonical phytochromes, but, regardless of the differences in the respective domain architectures, continues by means of comparable ground state intermediate steps up to Meta-F.
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e., available area and flexibility) within the binding pocket, while the general response actions following the photoexcitation are probably saved amongst the red/far-red phytochromes.
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